Andrew Su
Andrew Su
Professor
The Scripps Research Institute
asuscrippsedu
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Bio
Andrew is a Professor at the Scripps Research Institute in the Department of Integrative, Structural and Computational Biology (ISCB). His research focuses on building and applying bioinformatics infrastructure for biomedical discovery. His research has a particular emphasis on leveraging crowdsourcing for genetics and genomics. Representative projects include the Gene Wiki, BioGPS, MyGene.Info, and Mark2Cure, each of which engages the crowd to help organize biomedical knowledge. These resources are collectively used millions of times every month by members of the research community, by students, and by the general public.
Education
Ph.D., Chemistry; The Scripps Research Institute
BA, Chemistry, Computing and Information Systems, and Integrated Science; Northwestern University
Recent Posts
Postdocs wanted
by Andrew Su | Aug 16, 2011 | jobs, recruiting, sulab
It’s been about two months since we hit the ground here at Scripps. Overall, things have been great. Our new lab (office) space is newly renovated, our servers are up and running, and we’re back to doing science. It’s time to...BioInform profile of the Gene Wiki
by Andrew Su | Aug 8, 2011 | Gene Wiki, ISMB2011, Uncategorized
Genomeweb’s BioInform newsletter just published a profile of our Gene Wiki effort (free registration required). The article was prompted by my keynote presentation and Ben Good’s paper in the Bio-ontologies SIG at ISMB. Inspired to get...Twenty questions for genes
by Andrew Su | Jul 26, 2011 | community intelligence, games, GO, long tail
Part 1: Introduction to the concept (this post) Part 2: The prototype game Part 3: Evaluation framework If I asked you to think of your favorite gene, do you think I could guess the identity of that gene by first asking you twenty yes / no...Gene Wiki presentation at ISMB
by Andrew Su | Jul 25, 2011 | bio-ontologies, Gene Wiki, ISMB, presentation
I had the privilege of giving a keynote presentation at the ISMB Bio-ontologies SIG in Vienna earlier this month. This audience was perfect for us as we try to move the (mostly) unstructured Gene Wiki toward structured gene annotations. I...Recent Publications
Drug Repurposing using consilience of Knowledge Graph Completion methods
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Author Correction: Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing
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Perspectives on tracking data reuse across biodata resources
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Repositioning the Early Pathology of Type 1 Diabetes to the Extraislet Vasculature
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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for complete publication list, see google scholar