Andrew Su

Andrew Su

Andrew Su

Professor

Department of Integrative, Structural and Computational Biology
The Scripps Research Institute
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Bio

Andrew is a Professor at the Scripps Research Institute in the Department of Integrative, Structural and Computational Biology (ISCB). His research focuses on building and applying bioinformatics infrastructure for biomedical discovery. His research has a particular emphasis on leveraging crowdsourcing for genetics and genomics. Representative projects include the Gene Wiki, BioGPS, MyGene.Info, and Mark2Cure, each of which engages the crowd to help organize biomedical knowledge. These resources are collectively used millions of times every month by members of the research community, by students, and by the general public.

Education

Ph.D., Chemistry; The Scripps Research Institute
BA, Chemistry, Computing and Information Systems, and Integrated Science; Northwestern University

Recent Posts

Help choose our new logo!

by | Feb 8, 2011 | BioGPS

BioGPS is growing in usage (over 150,000 page views in the last month!) and that popularity justifies a little professional makeover. Later this year we’ll be releasing a drastically improved user interface that will be both easier on the...

Recruiting for a postdoc in bioinformatics

by | Jan 14, 2011 | jobs, recruiting

GNF is now recruiting for a postdoctoral associate to join our Bioinformatics group. Details are in the official job posting, but generally speaking this individual will be involved in large scale data mining projects from public and proprietary...

Upcoming webinar on the Gene Wiki

by | Sep 30, 2010 | Gene Wiki

Just a quick note that Ben Good and I will be presenting for the NCBO’s webinar series next week on the Gene Wiki. The title of the talk will be “The Gene Wiki: Cultivating and mining community intelligence in biology”. Feel free...

The Gene Wiki gets NIH support

by | Aug 5, 2010 | Gene Wiki

Even though this blog was initially created to cover our BioGPS gene portal application, one of the broader themes of our group’s research is harnessing community intelligence in biology. And aside from BioGPS, our other main project in this space...

We love model organisms too

by | Jul 1, 2010 | BioGPS, plugin

Given our group’s interests in mammalian biology, we initially focused on gene annotation data from just three species — human, mouse and rat. However, the plugin concept that BioGPS uses is easily extensible to other organisms as well....

Recent Publications

Drug Repurposing using consilience of Knowledge Graph Completion methods
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Author Correction: Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing
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Perspectives on tracking data reuse across biodata resources
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Repositioning the Early Pathology of Type 1 Diabetes to the Extraislet Vasculature
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Author Correction: A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses
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An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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for complete publication list, see google scholar