Andrew Su

Andrew Su

Andrew Su

Professor

Department of Integrative, Structural and Computational Biology
The Scripps Research Institute
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Bio

Andrew is a Professor at the Scripps Research Institute in the Department of Integrative, Structural and Computational Biology (ISCB). His research focuses on building and applying bioinformatics infrastructure for biomedical discovery. His research has a particular emphasis on leveraging crowdsourcing for genetics and genomics. Representative projects include the Gene Wiki, BioGPS, MyGene.Info, and Mark2Cure, each of which engages the crowd to help organize biomedical knowledge. These resources are collectively used millions of times every month by members of the research community, by students, and by the general public.

Education

Ph.D., Chemistry; The Scripps Research Institute
BA, Chemistry, Computing and Information Systems, and Integrated Science; Northwestern University

Recent Posts

The retirement of SymAtlas

by | Nov 24, 2009 | BioGPS

Although SymAtlas has served us well over the years, it’s finally time for its graceful retirement. We’ve been keeping it running on life support for quite some time now (with varying degrees of success). We’ve tried to make the...

Correlation search

by | Nov 23, 2009 | BioGPS, feature

Many of you know that the precursor to BioGPS was another web tool called SymAtlas. While SymAtlas was great, BioGPS was meant to expand on that design by focusing on community extensibility and user customizability. We are very proud that BioGPS...

BioGPS manuscript published in Genome Biology

by | Nov 19, 2009 | BioGPS

The manuscript describing BioGPS has just been published online in Genome Biology! Currently it’s only available as a provisional PDF, but the final typeset version should be available in the next couple weeks. [Edit: the final version of the...

BioGPS now supports Drosophila genes

by | Nov 18, 2009 | BioGPS, feature, plugin

Although the data and functionality have been in place for a while, this post is the official announcement that BioGPS now supports Drosophila genes and data. What does this mean? Three things:View Drosophila data. As shown in the figure at right,...

Usage update: November 2009

by | Nov 16, 2009 | BioGPS, usage stats

It’s been several months since the last usage update in June so I thought I’d post some updated numbers. In addition to the standard metrics below, I plotted our growth in page views and website visits over time starting at the...

Recent Publications

Drug Repurposing using consilience of Knowledge Graph Completion methods
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Author Correction: Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing
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Perspectives on tracking data reuse across biodata resources
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Repositioning the Early Pathology of Type 1 Diabetes to the Extraislet Vasculature
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Author Correction: A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses
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An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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for complete publication list, see google scholar