Andrew Su

Andrew Su

Andrew Su

Professor

Department of Integrative, Structural and Computational Biology
The Scripps Research Institute
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Bio

Andrew is a Professor at the Scripps Research Institute in the Department of Integrative, Structural and Computational Biology (ISCB). His research focuses on building and applying bioinformatics infrastructure for biomedical discovery. His research has a particular emphasis on leveraging crowdsourcing for genetics and genomics. Representative projects include the Gene Wiki, BioGPS, MyGene.Info, and Mark2Cure, each of which engages the crowd to help organize biomedical knowledge. These resources are collectively used millions of times every month by members of the research community, by students, and by the general public.

Education

Ph.D., Chemistry; The Scripps Research Institute
BA, Chemistry, Computing and Information Systems, and Integrated Science; Northwestern University

Recent Posts

A Gene Wiki usage update

by | Apr 28, 2009 | Gene Wiki

It’s been over a year since we created the Gene Wiki, and nine months since the effort was published. We previously blogged about the vision as it relates to the Long Tail, and many others have written about the effort too.So one year later,...

BioGPS's next organism

by | Apr 17, 2009 | BioGPS

BioGPS currently only supports three organisms: human, mouse, and rat. This obviously reflects the mammalian bias in our internal research programs.However, after a recent presentation at the SDCSB symposium, we got a lot of feedback from people...

Unexpected downtime

by | Apr 14, 2009 | BioGPS

We’re aware that BioGPS has been a bit flaky in the last couple of days. At various times, the server has not been responding, or searches have not been successfully executing. We have developers and system administrators looking into the...

The who's who of BioGPS users

by | Apr 6, 2009 | BioGPS, usage stats

To follow up on the previously-posted usage metrics, I did a quick analysis of our registered BioGPS users, and here’s the top 10 institutions represented (outside of GNF, of course):Harvard UniversityScripps Research InstituteUniversity of...

Recent Publications

Drug Repurposing using consilience of Knowledge Graph Completion methods
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Author Correction: Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing
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Perspectives on tracking data reuse across biodata resources
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Repositioning the Early Pathology of Type 1 Diabetes to the Extraislet Vasculature
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Author Correction: A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses
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An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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for complete publication list, see google scholar