OncoRep is a fully automated RNA-Seq based report for patients with (breast) cancer, which includes molecular classification, detection of altered genes, detection of altered pathways, identification of gene fusion events, identification of clinical actionable mutations (in coding regions) and identification of treatable target structures. Furthermore, OncoRep reports suitable drugs based on identified actionable targets, which can be considered in the treatment decision making process.

OncoRep Repository:https://bitbucket.org/sulab/oncorep

Sample Reports:

Sample Report SRR1027171	Sample Report SRR1027172	Sample Report SRR1027173	Sample Report SRR1027174
Sample Report SRR1027175	Sample Report SRR1027176	Sample Report SRR1027177	Sample Report SRR1027178
Sample Report SRR1027179	Sample Report SRR1027180	Sample Report SRR1027181	Sample Report SRR1027182
Sample Report SRR1027183	Sample Report SRR1027184	Sample Report SRR1027185	Sample Report SRR1027186
Sample Report SRR1027187