Andrew Su
Andrew Su
Professor
The Scripps Research Institute
asuscrippsedu
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Bio
Andrew is a Professor at the Scripps Research Institute in the Department of Integrative, Structural and Computational Biology (ISCB). His research focuses on building and applying bioinformatics infrastructure for biomedical discovery. His research has a particular emphasis on leveraging crowdsourcing for genetics and genomics. Representative projects include the Gene Wiki, BioGPS, MyGene.Info, and Mark2Cure, each of which engages the crowd to help organize biomedical knowledge. These resources are collectively used millions of times every month by members of the research community, by students, and by the general public.
Education
Ph.D., Chemistry; The Scripps Research Institute
BA, Chemistry, Computing and Information Systems, and Integrated Science; Northwestern University
Recent Posts
Cloud presentation on BioGPS and mygene.info
by Andrew Su | Feb 28, 2012 | BioGPS, conference
Last week, I gave a talk at the Cloud Computing Symposium of the Molecular Med Tri-Con conference. It was an interesting line up of speakers on all aspects of cloud computing, and got a chance to catch up with several familiar faces. Slides are now...Publication review 2011
by Andrew Su | Feb 6, 2012 | Gene Wiki, publication, semantic web, text-mining, wikipedia
As the end of 2011 was a busy time grant-writing, I didn’t get an opportunity to highlight several recent publications that came out from our lab. Better late than never: Hu Y, Galkin AV, Wu C, Reddy V, Su AI (2011) CAFET Algorithm Reveals...BioGPS iPhone app update
by Andrew Su | Feb 2, 2012 | BioGPS, outsourcing
Back in November 2011, we announced that we were starting a long-overdue update of the BioGPS iPhone app. We’d intended to post periodic updates of that process here on the blog, but the holidays and grant deadlines conspired to make that...Dizeez to novel gene annotations
by Andrew Su | Nov 18, 2011 | community intelligence, dizeez, games
We’ve been hard at work mining the logs for the Dizeez game (see past posts for context). To summarize the take home message, the Dizeez game resulted in the identification of several novel gene-disease annotations. We used a psuedo-gold...Recent Publications
Drug Repurposing using consilience of Knowledge Graph Completion methods
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Author Correction: Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing
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Perspectives on tracking data reuse across biodata resources
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Repositioning the Early Pathology of Type 1 Diabetes to the Extraislet Vasculature
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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DrugMechDB: A Curated Database of Drug Mechanisms
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BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
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for complete publication list, see google scholar