by ginger | Nov 6, 2017 | BioGPS, data release, spotlight
In BioGPS, there are a number of Intermine-based model organism plugins (and to a lesser extent model organism data sets) which allow users to explore gene expression in organisms typically studied in biomedical research. Model organisms such as mice, rats, flies,...
by ginger | Sep 25, 2017 | clinvar, data release, dbnsfp, myvariant.info, snpeff, uniprot
Don’t want to look through our blog posts to find previous information about data updates on MyVariant.info? Now you don’t have to! Metadata about our data updates is now being logged on in our docs at...
by Kevin Xin | Aug 10, 2017 | data release, myvariant.info
Another fresh data release for MyVariant.info is out! In this data release, we have updated the data from ClinVar and UniProtKB to their latest versions, and also added variant annotation from CIViC and Cancer Genome Interpreter. Here are more details. Data Sources...
by Kevin Xin | Jun 20, 2017 | data release, myvariant.info
Another fresh data release for MyVariant.info is out! In this data release, we have updated the data from ClinVar to their latest versions, and also added two new fields under ClinVar and ExAC to handle specific cases, including genotype set and multi-allelic...
by Chunlei Wu | Apr 26, 2017 | data release, myvariant.info
Another fresh data release for MyVariant.info is out! As we mentioned in the last data release, a refactored backend for data aggregation and updating is now in-place, which streamlines our process of keeping variant annotations up-to-date. In this data release, we...
by Chunlei Wu | Apr 18, 2017 | data release, mygene.info
Just a quick highlight of our recent update on all pathway data in MyGene.info API. Thanks to the excellent pathway/interaction database from ConsensusPathDB, we updated all 10 pathway sub-fields (listed below) for three species (human, mouse and yeast). The...
