The Su Lab
  • Home
  • Research
    • Crowdsourcing Biology
      • BioGPS
      • Gene Wiki
      • Mark2Cure
    • Integrative Biology
    • Funding Sources
  • Tools
    • BioGPS
    • Omics Pipe
    • OncoRep
  • Blog
  • The team
    • Andrew Su
    • The team
      • Chunlei Wu
      • Staff Scientists
        • Ginger Tsueng
        • Laura Hughes
        • Yao Yao
        • Meghamala Sinha
      • Research Programmers
        • Marco Cano
        • Julia Mullen
        • Zhongchao Qian
        • Ricardo Avila
        • Colleen Xu
        • Jackson Callaghan
        • Nichollette Acosta
        • Jason Lin
        • Candice Czech
        • Karina Zaiets
      • Postdoctoral Research Associates
        • Sabah Ul-Hasan
        • Eric Hu
      • Graduate Students
        • Roger Tu
        • Janet Joy
        • Carolina Gonzalez-Cavazos
      • Other
        • Emily Haag
        • Sander Su
      • Interns
    • Collaborators
    • Join the team
  • Media
    • Photos
    • Presentation Slides
    • Videos
  • Publications
  • Contact us
  • Diversity
Select Page

2016–More incredible for MyVariant.info than MyGene.info

by ginger | Dec 28, 2016 | myvariant.info, myvariant.py

As mentioned in MyGene.info’s year-end review, the team behind both services have been very productive. In addition to all the work they did on MyGene.info (and the back-end/BioThings services behind both MyGene.info and MyVariant.info, they made the following...

New data release out! ClinVar data structure overhauled

by Kevin Xin | Jan 6, 2016 | clinvar, data release, myvariant.info, myvariant.py

Update: On Jan. 18th, we updated ClinVar data to their latest 201501 release. Another new data release was just rolled out. ClinVar and CADD data were updated to their latest: last release new release # of variants in new release # of variants in last release ClinVar...

New data release out! ClinVar data structure overhauled

by Kevin Xin | Jan 6, 2016 | data release, myvariant.info, myvariant.py

Another new data release was just rolled out. ClinVar and CADD data were updated to their latest: last release new release # of variants in new release # of variants in last release ClinVar 201509 201511 127,745 114,627 CADD v1.2 v1.3 226,932,858 163,690,986 ClinVar...

New release: MyVariant.info Python client updated to v0.2.0

by Chunlei Wu | Nov 2, 2015 | myvariant.info, myvariant.py

We have just released a new version of MyVariant.info Python client. It is now on v0.2.0, and we encourage all of our users to upgrade to this new version. The upgrade is as easy as one line of command: pip install myvariant -U To verify you have the latest version...

New release: MyVariant.info Python client updated to v0.2.0

by Chunlei Wu | Nov 2, 2015 | myvariant.info, myvariant.py

We have just released a new version of MyVariant.info Python client. It is now on v0.2.0, and we encourage all of our users to upgrade to this new version. The upgrade is as easy as one line of command: pip install myvariant -U To verify you have the latest version...

MyVariant.py: our Python client for MyVariant.info services

by Chunlei Wu | Aug 12, 2015 | myvariant.info, myvariant.py, python

We are happy to announce that the official Python client (“MyVariant.py”) for our MyVariant.info web services is now available from PyPI (the Python Package Index). MyVariant.py allows users to annotate or query for human variants, either a single variant...
« Older Entries

Subscribe

Enter your email address:

Archives

Categories

  • #citscichat (1)
  • abstract (1)
  • alpha_variant (1)
  • amt (3)
  • annual summary (3)
  • api (5)
  • application (2)
  • ASHG (1)
  • assembly (2)
  • Audubon Bird Counts (1)
  • award (2)
  • banner (2)
  • BD2K (6)
  • befree (1)
  • big data (4)
  • bio-ontologies (4)
  • biocuration (9)
  • BioGPS (224)
  • bioinformatics (18)
  • Biomedical Informatics (3)
  • biomedical research (2)
  • BioThings (27)
  • book (1)
  • breast cancer (8)
  • cancer (8)
  • career (3)
  • career advice (2)
  • challenges (1)
  • chordoma (2)
  • circos (1)
  • citizen science (103)
  • CitSci2017 (1)
  • CitSciMedBlitz (2)
  • class prediction (1)
  • classification (3)
  • client (9)
  • clinvar (2)
  • Cochrane Crowd (8)
  • code (4)
  • collective intelligence (12)
  • collective wisdom (7)
  • combo (1)
  • community intelligence (31)
  • community-annotation (17)
  • conference (24)
  • cover letter (2)
  • COVID-19 (1)
  • covid19_testing (1)
  • crowdsourcing (114)
  • cryo-em (1)
  • customizability (5)
  • Data Discovery Engine (3)
  • data mining (8)
  • data release (13)
  • database (4)
  • data_journalism (1)
  • Dazzle4Rare (1)
  • dbnsfp (1)
  • decision-trees (2)
  • deepdive (1)
  • delta_variant (3)
  • disease ontology (3)
  • dizeez (4)
  • Dizeez. GenESP (1)
  • driving biological project (2)
  • DrugMechDB (1)
  • events (3)
  • exac (2)
  • extensibility (6)
  • EyesOnAlz (3)
  • eyewire (1)
  • FAIR data (2)
  • feature (14)
  • feature selection (1)
  • Featured Article Series (23)
  • Featured Researcher Series (1)
  • fitting in (1)
  • foldit (2)
  • funding (3)
  • GalaxyZoo (1)
  • games (30)
  • GenBank (1)
  • gene expression (2)
  • GENE journal (1)
  • gene ontology (2)
  • Gene Wiki (54)
  • genegames (8)
  • GeneOfTheWeek (53)
  • genesp (1)
  • genewiki+ (5)
  • GeneWikiRenewal (7)
  • genome (2)
  • genome biology (2)
  • genomics (3)
  • GO (4)
  • grant (7)
  • GSoC (3)
  • gwaps (11)
  • hackathon (10)
  • hassan (1)
  • hgf (2)
  • hockey (1)
  • http (1)
  • https (1)
  • human (1)
  • hypothesis generation (1)
  • information extraction (1)
  • interview (1)
  • ISCB (1)
  • ISMB (3)
  • ISMB2011 (2)
  • ISMB2012 (2)
  • job (2)
  • job search (2)
  • jobs (8)
  • JSON-LD (1)
  • knowledge.bio (1)
  • layouts (5)
  • long tail (9)
  • lua (1)
  • machine learning (4)
  • mark2cure (113)
  • mascot (1)
  • mashup (2)
  • mass collaboration (2)
  • MedLitBlitz (3)
  • microaray (1)
  • microformats (1)
  • microtask (4)
  • migration (3)
  • mobianga (1)
  • mouse (1)
  • mygene (9)
  • mygene.info (38)
  • mygene.py (5)
  • mygene.R (1)
  • myvariant.info (29)
  • myvariant.js (2)
  • myvariant.py (7)
  • myvariant.R (2)
  • NAGA (1)
  • NAR (2)
  • national park services (1)
  • natural-language-processing (1)
  • network (1)
  • network of biothings (6)
  • Network-Augmented Genomic Analysis (1)
  • new job (1)
  • newrelease (7)
  • NewYear (4)
  • NIH (5)
  • nlp (6)
  • nodejs (2)
  • office space (1)
  • Omics Pipe (1)
  • Ontologies (1)
  • Ontologies (1)
  • open participation science (5)
  • open science (5)
  • Outbreak.info (19)
  • outsourcing (3)
  • Personalized Medicine (1)
  • pipelines (1)
  • plugin (39)
  • policy (1)
  • polls (1)
  • postdoc (1)
  • poster (5)
  • presentation (8)
  • press (3)
  • press (2)
  • prize (2)
  • proposal (2)
  • publication (8)
  • publications (3)
  • pulse (1)
  • python (7)
  • quotes (1)
  • r21 (1)
  • r4d (1)
  • random forest (1)
  • Rare diseaes (1)
  • Rare Disease Day (1)
  • recruiting (10)
  • research (5)
  • review articles (1)
  • sage (2)
  • san diego (2)
  • schemas (3)
  • science (4)
  • Science contest (3)
  • Science Game Lab (1)
  • scistarter (2)
  • search (2)
  • semantic links (2)
  • semantic web (8)
  • semantic wikipedia (4)
  • serious games (2)
  • SGL (1)
  • snpeff (1)
  • SPARQL (5)
  • special-session (1)
  • species (4)
  • spotlight (29)
  • staff-scientist (2)
  • starving student (1)
  • student (1)
  • Su lab (4)
  • Su lab members (11)
  • sulab (114)
  • Surfing (1)
  • SWL (2)
  • symatlas (5)
  • synapse (1)
  • taxonomy (3)
  • tech (3)
  • text-mining (3)
  • The Cure (2)
  • thecure (5)
  • Thursday Science (3)
  • topcoder (3)
  • training period (1)
  • tsri (2)
  • tutorial (1)
  • Twitter (2)
  • UMLS (1)
  • Uncategorized (5)
  • uniprot (1)
  • usage stats (12)
  • user_stories (5)
  • vaccination (1)
  • variants (4)
  • visualization (3)
  • Web (1)
  • web development (2)
  • web services (5)
  • Webinar (1)
  • wiki (10)
  • Wikidata (11)
  • wikipedia (14)
  • wisdom of the crowd (1)
  • work (18)
  • work place terratories (1)
  • zooniverse (4)
  • Twitter
  • Google
  • RSS
The Su Lab © 2021 All content CC-BY-NC.