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BioGPS data overhaul! More datasets, new features, and more!

by ginger | Jun 30, 2015 | BioGPS, web services

BioGPS has overhauled all the datasets in our dataset library. The datasets available in our library used to come from GEO. Now, the datasets have been imported from ArrayExpress, which translates into some awesome new features to use in your research! Previously,...

MyGene.info: we need your support!

by Chunlei Wu | May 20, 2014 | BioGPS, bioinformatics, grant, mygene.info, web services

It has been almost a year since we released the v2 API of MyGene.info services last July. MyGene.info has grown from an internal service behind BioGPS to a robust, high-performance service provider for anybody to query for up-to-date gene annotation data. Currently,...

Quick ID mapping using MyGene.info

by Chunlei Wu | Oct 1, 2013 | BioGPS, bioinformatics, mygene.info, web services

ID mapping is a very common, and often not fun, task for every bioinformatician. Suppose you have a list of gene symbols or reporter ids from an upstream analysis, and then your next analysis requires the use of gene IDs (e.g. Entrez gene IDs or Ensembl gene IDs)....

MyGene.info v2 API goes live!

by Chunlei Wu | Jul 15, 2013 | BioGPS, bioinformatics, mygene.info, web services

We are happy to announce that the MyGene.info Version 2 Application Programming Interface (API) is now live. In the v2 API, we have rebuilt the core framework, which increases both data capacity and query performance significantly. For those who are...

Molecular Predictor Repository? (not gene set repository)

by bgood | Apr 27, 2013 | bioinformatics, classification, gene expression, microaray, sage, sulab, synapse, web services

I have a simple question.  Say that I have the results from a gene expression analysis done in my laboratory or pulled from a public repository.  Say the sample has something to do with cancer (or I think that it might).  Say I read about so called...

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